Detailed information of OS493_013257-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_013257-T1LITHOSTATHINEscaffold_3518692901884424-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF09458H_lectinH-type lectin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002350DomainKazal domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR019019DomainH-type lectin domainInterproscan
IPR037221Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050801FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22801LITHOSTATHINEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_013257-T1 global RNA-seq network
TOP