Detailed information of OS493_013219-T1 in Lophelia pertusa

Genomic Location: scaffold_35:1329515...1333378
NR annotation: KAJ7362128.1, hypothetical protein OS493_013219 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P29506Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN=unc-4 PE=1 SV=2
O08934Homeobox protein unc-4 homolog OS=Mus musculus OX=10090 GN=Uncx PE=2 SV=2
P97830Homeobox protein unc-4 homolog OS=Rattus norvegicus OX=10116 GN=Uncx PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03826OAROAR motifMotifInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050649FamilyPaired Homeobox Transcription FactorsInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR003654DomainOAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24329HOMEOBOX PROTEIN ARISTALESSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

Expression pattern
 Expression trend for OS493_013219-T1 global co-expression network
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