Detailed information of OS493_013200-T1 in Lophelia pertusa

Genomic Location: scaffold_35:1127664...1129439
NR annotation: KAJ7362109.1, hypothetical protein OS493_013200 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR050752FamilyC2H2-type zinc-finger domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24384FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09228KRAB; KRAB domain-containing zinc finger protein-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_013200-T1 global co-expression network
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