Detailed information of OS493_013011-T1 in Lophelia pertusa

Genomic Location: scaffold_34:2285387...2299113
NR annotation: KAJ7373418.1, DDB1- and CUL4-associated factor 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80T85DDB1- and CUL4-associated factor 5 OS=Mus musculus OX=10090 GN=Dcaf5 PE=1 SV=2
Q96JK2DDB1- and CUL4-associated factor 5 OS=Homo sapiens OX=9606 GN=DCAF5 PE=1 SV=2
O94527WD repeat protein iqw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=iqw1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045151FamilyDDB1- and CUL4-associated factor 8-likeInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11800DCAF5, BCRP2; DDB1- and CUL4-associated factor 5-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_013011-T1 global co-expression network
TOP