Detailed information of OS493_012692-T1 in Lophelia pertusa

Genomic Location: scaffold_33:2090246...2091876
NR annotation: KAJ7379931.1, tripartite motif containing [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q29RQ5E3 ubiquitin-protein ligase TRIM9 OS=Bos taurus OX=9913 GN=TRIM9 PE=2 SV=1
Q9C026E3 ubiquitin-protein ligase TRIM9 OS=Homo sapiens OX=9606 GN=TRIM9 PE=1 SV=1
Q91ZY8E3 ubiquitin-protein ligase TRIM9 OS=Rattus norvegicus OX=10116 GN=Trim9 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047153FamilyTRIM45/56/19Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

Expression pattern
 Expression trend for OS493_012692-T1 global co-expression network
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