Detailed information of OS493_012623-T1 in Lophelia pertusa

Genomic Location: scaffold_33:1225099...1239202
NR annotation: KAJ7379869.1, Echinoderm microtubule-associated protein-like 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6ZMW3Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens OX=9606 GN=EML6 PE=1 SV=2
Q5SQM0Echinoderm microtubule-associated protein-like 6 OS=Mus musculus OX=10090 GN=Eml6 PE=2 SV=1
Q8BQM8Echinoderm microtubule-associated protein-like 5 OS=Mus musculus OX=10090 GN=Eml5 PE=2 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF03451HELPHELP motifRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan
IPR005108Conserved_siteHELP motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13720WD-40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan

Expression pattern
 Expression trend for OS493_012623-T1 global co-expression network
TOP