Detailed information of OS493_012533-T1 in Lophelia pertusa

Genomic Location: scaffold_33:242172...246684
NR annotation: KAJ7379787.1, hypothetical protein OS493_012533 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q54P77Probable 4-coumarate--CoA ligase 1 OS=Dictyostelium discoideum OX=44689 GN=4cl1 PE=3 SV=1
Q54P79Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum OX=44689 GN=4cl3 PE=3 SV=2
P149134-coumarate--CoA ligase 2 OS=Petroselinum crispum OX=4043 GN=4CL2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24096LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016405Molecular FunctionCoA-ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K019044CL; 4-coumarate--CoA ligaseEC:6.2.1.12
Phenylpropanoid biosynthesisko00940deepkoala

Expression pattern
 Expression trend for OS493_012533-T1 global co-expression network
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