Detailed information of OS493_012421-T1 in Lophelia pertusa

Genomic Location: scaffold_32:2078475...2085860
NR annotation: KAJ7386081.1, hypothetical protein OS493_012421 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q503U0LIM domain only protein 3 OS=Danio rerio OX=7955 GN=lmo3 PE=2 SV=1
Q99MB5LIM domain only protein 3 OS=Rattus norvegicus OX=10116 GN=Lmo3 PE=2 SV=2
Q9YH16LIM domain only protein 3 OS=Xenopus laevis OX=8355 GN=lmo3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR050945FamilyLMO/RBTN Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45787LD11652PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0140297Molecular FunctionDNA-binding transcription factor bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24098LMO1_3; rhombotin-1/3-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Expression pattern
 Expression trend for OS493_012421-T1 global co-expression network
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