Detailed information of OS493_012064-T1 in Lophelia pertusa

Genomic Location: scaffold_31:1412967...1422207
NR annotation: KAJ7392402.1, Polycomb group RING finger protein 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3DK16Polycomb group RING finger protein 5-A OS=Danio rerio OX=7955 GN=pcgf5a PE=2 SV=1
Q86SE9Polycomb group RING finger protein 5 OS=Homo sapiens OX=9606 GN=PCGF5 PE=1 SV=1
Q3UK78Polycomb group RING finger protein 5 OS=Mus musculus OX=10090 GN=Pcgf5 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|RAWUL

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16207RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR032443DomainRAWUL domainInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR051507FamilyPolycomb group RING fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45893POLYCOMB GROUP RING FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0035102Cellular ComponentPRC1 complexInterproscan
GO:0036353Biological Processobsolete histone H2A-K119 monoubiquitinationInterproscan

Expression pattern
 Expression trend for OS493_012064-T1 global co-expression network
TOP