Detailed information of OS493_012020-T1 in Lophelia pertusa

Genomic Location: scaffold_31:937551...940990
NR annotation: KAJ7392360.1, hypothetical protein OS493_012020 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BI21E3 ubiquitin-protein ligase RNF38 OS=Mus musculus OX=10090 GN=Rnf38 PE=2 SV=2
Q9H0F5E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4
Q08CG8RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46171GH10160PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19041RNF38_44; E3 ubiquitin-protein ligase RNF38/44EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_012020-T1 global co-expression network
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