Detailed information of OS493_011882-T1 in Lophelia pertusa

Genomic Location: scaffold_30:2750899...2751859
NR annotation: KAJ7336661.1, Transcription factor lbx1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q804R0Transcription factor LBX2 OS=Danio rerio OX=7955 GN=lbx2 PE=1 SV=1
Q2PYN8Transcription factor LBX1 OS=Xenopus laevis OX=8355 GN=lbx1 PE=2 SV=1
Q0P4H6Transcription factor LBX1 OS=Xenopus tropicalis OX=8364 GN=lbx1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR051892FamilyLBX Family Transcription FactorsInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24336TRANSCRIPTION FACTOR LBXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:1990837Molecular Functionsequence-specific double-stranded DNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_011882-T1 global co-expression network
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