Detailed information of OS493_011834-T1 in Lophelia pertusa

Genomic Location: scaffold_30:2199083...2200768
NR annotation: KAJ7336615.1, hypothetical protein OS493_011834 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R1W3E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 GN=Rnf103 PE=2 SV=2
Q9EPZ8E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=10116 GN=Rnf103 PE=2 SV=1
O00237E3 ubiquitin-protein ligase RNF103 OS=Homo sapiens OX=9606 GN=RNF103 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17123zf-RING_11RING-like zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR042494FamilyE3 ubiquitin-protein ligase RNF103Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15302E3 UBIQUITIN-PROTEIN LIGASE RNF103Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15695RNF103, KF1; E3 ubiquitin-protein ligase RNF103EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_011834-T1 global co-expression network
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