Detailed information of OS493_011759-T1 in Lophelia pertusa

Genomic Location: scaffold_30:1188494...1201206
NR annotation: KAJ7336546.1, hypothetical protein OS493_011759 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DC33High mobility group protein 20A OS=Mus musculus OX=10090 GN=Hmg20a PE=1 SV=1
Q9NP66High mobility group protein 20A OS=Homo sapiens OX=9606 GN=HMG20A PE=1 SV=1
Q32L68SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Bos taurus OX=9913 GN=HMG20B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR051965FamilyChromatin Regulation and Neuronal Gene ExpressionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46040HIGH MOBILITY GROUP PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

Expression pattern
 Expression trend for OS493_011759-T1 global co-expression network
TOP