Detailed information of OS493_011708-T1 in Lophelia pertusa

Genomic Location: scaffold_30:344792...352882
NR annotation: KAJ7336503.1, WD repeat-containing protein 6 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RB07tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Pongo abelii OX=9601 GN=WDR6 PE=2 SV=1
A7Z052tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Bos taurus OX=9913 GN=WDR6 PE=2 SV=1
Q9NNW5tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Homo sapiens OX=9606 GN=WDR6 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR051973FamilytRNA Anticodon Loop Methyltransferase RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14344WD REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan

Expression pattern
 Expression trend for OS493_011708-T1 global co-expression network
TOP