Detailed information of OS493_011691-T1 in Lophelia pertusa

Genomic Location: scaffold_30:206049...231629
NR annotation: KAJ7336489.1, mms19 nucleotide excision repair [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D071MMS19 nucleotide excision repair protein homolog OS=Mus musculus OX=10090 GN=Mms19 PE=1 SV=1
Q0V9L1MMS19 nucleotide excision repair protein homolog OS=Xenopus tropicalis OX=8364 GN=mms19 PE=2 SV=2
Q6DCF2MMS19 nucleotide excision repair protein homolog OS=Xenopus laevis OX=8355 GN=mms19 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14500MMS19_NDos2-interacting transcription regulator of RNA-Pol-IIDomainInterproscan
PF12460MMS19_CRNAPII transcription regulator C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR039920FamilyDNA repair/transcription protein MET18/MMS19Interproscan
IPR029240DomainMMS19, N-terminalInterproscan
IPR024687DomainMMS19, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12891DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transferInterproscan

Expression pattern
 Expression trend for OS493_011691-T1 global co-expression network
TOP