Detailed information of OS493_011638-T1 in Lophelia pertusa

Genomic Location: scaffold_29:3215468...3218905
NR annotation: KAJ7363350.1, Ubiquitin-conjugating enzyme E2 B [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49459Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens OX=9606 GN=UBE2A PE=1 SV=2
Q9Z255Ubiquitin-conjugating enzyme E2 A OS=Mus musculus OX=10090 GN=Ube2a PE=1 SV=1
P25153Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster OX=7227 GN=Ubc6 PE=2 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|UBC-like|UBC
Ubiquitin FamilyE2|UEV|UEV

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR050113FamilyUbiquitin-conjugating enzymeInterproscan
IPR023313Active_siteUbiquitin-conjugating enzyme, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24067UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016574Biological Processobsolete histone ubiquitinationInterproscan
GO:0033503Cellular ComponentHULC complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061631Molecular Functionubiquitin conjugating enzyme activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10573UBE2A, UBC2, RAD6A; ubiquitin-conjugating enzyme E2 AEC:2.3.2.23
DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_011638-T1 global co-expression network
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