Detailed information of OS493_011548-T1 in Lophelia pertusa

Genomic Location: scaffold_29:2347598...2350034
NR annotation: KAJ7363266.1, hypothetical protein OS493_011548 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07525SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051573FamilyAnkyrin repeat and SOCS box domain-containing proteinInterproscan
IPR001496DomainSOCS box domainInterproscan
IPR036036Homologous_superfamilySOCS box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24136SOWAH (DROSOPHILA) HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0045732Biological Processpositive regulation of protein catabolic processInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10335ASB13; ankyrin repeat and SOCS box protein 13-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_011548-T1 global co-expression network
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