Detailed information of OS493_011277-T1 in Lophelia pertusa

Genomic Location: scaffold_28:2400139...2413558
NR annotation: KAJ7373668.1, MutS protein msh4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99MT2MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1
O15457MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2
F4JP48DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05188MutS_IIMutS domain IIDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

Expression pattern
 Expression trend for OS493_011277-T1 global co-expression network
TOP