Detailed information of OS493_011079-T1 in Lophelia pertusa

Genomic Location: scaffold_28:126700...129746
NR annotation: KAJ7373484.1, Calcium-regulated heat stable protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y534Cold shock domain-containing protein C2 OS=Homo sapiens OX=9606 GN=CSDC2 PE=1 SV=1
Q91YQ3Cold shock domain-containing protein C2 OS=Mus musculus OX=10090 GN=Csdc2 PE=1 SV=2
Q9Y2V2Calcium-regulated heat-stable protein 1 OS=Homo sapiens OX=9606 GN=CARHSP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052069FamilyCalcium-regulated mRNA-binding domain-containing proteinInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR011129DomainCold shock domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12962CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043488Biological Processregulation of mRNA stabilityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

Expression pattern
 Expression trend for OS493_011079-T1 global co-expression network
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