Detailed information of OS493_011060-T1 in Lophelia pertusa

Genomic Location: scaffold_27:3657806...3660785
NR annotation: KAJ7380337.1, hypothetical protein OS493_011060, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5E5Protocadherin beta-4 OS=Homo sapiens OX=9606 GN=PCDHB4 PE=1 SV=1
Q5DRB6Protocadherin gamma-A4 OS=Pan troglodytes OX=9598 GN=PCDHGA4 PE=3 SV=1
Q5DRD0Protocadherin beta-4 OS=Pan troglodytes OX=9598 GN=PCDHB4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

Expression pattern
 Expression trend for OS493_011060-T1 global co-expression network
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