Detailed information of OS493_011031-T1 in Lophelia pertusa

Genomic Location: scaffold_27:3283074...3288849
NR annotation: KAJ7380311.1, WD repeat-containing protein 4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4IGH4tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 OS=Danio rerio OX=7955 GN=wdr4 PE=2 SV=2
Q7ZY78tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 OS=Xenopus laevis OX=8355 GN=wdr4 PE=2 SV=2
Q9EP82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 OS=Mus musculus OX=10090 GN=Wdr4 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

 InterPro
InterPro termTypeDescriptionSource
IPR028884FamilytRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16288WD40 REPEAT PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0036265Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527Cellular ComponenttRNA methyltransferase complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_011031-T1 global co-expression network
TOP