Detailed information of OS493_011031-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_011031-T1WD40 REPEAT PROTEIN 4scaffold_2732830743288849-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR028884FamilytRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16288WD40 REPEAT PROTEIN 4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0036265Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527Cellular ComponenttRNA methyltransferase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_011031-T1 global RNA-seq network
TOP