Detailed information of OS493_010928-T1 in Lophelia pertusa

Genomic Location: scaffold_27:1750025...1751371
NR annotation: KAJ7380214.1, miRNA binding [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P34611B-box type zinc finger protein ncl-1 OS=Caenorhabditis elegans OX=6239 GN=ncl-1 PE=2 SV=1
Q8MQJ9Protein brain tumor OS=Drosophila melanogaster OX=7227 GN=brat PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01436NHLNHL repeatRepeatInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10680PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

Expression pattern
 Expression trend for OS493_010928-T1 global co-expression network
TOP