Gene detail

Detailed information of OS493_010807-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_010807-T1	CENTROMERE PROTEIN E	scaffold_27	626672	658990	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_010807-T1

ATGAATCCTGATCCCAAGGAGTGTAATATCAAGGTTTTCTCTCGGTTTCGACCGCAATCGGACGCAGAAACTCGCGTTGGAGGGCAAAATATCGTGTCCACTCCAACGTCTGATACTTGTGTTCATGGGGGAAGGACTTATACGTTTGATCGCGTTTTCAAGTCGAATACCTCGCAAGAACGAGTCTATGTGGAAGCTGCTCAGGTCATCGTCCAAGATGTTCTCAATGGGTATAATGGAACTATATTTGCTTATGGACAGACGTCCAGTGGGAAAACCCACACCATGGAGGGTCGTCTTGATGATCCAGTTAATCAAGGAATTATTCCTCGAATTGTTCAAGATATATTCAATTACATCTACAATATGGATGAAAATTTGGAGTTCCATATTAAGGCAAGTTTCTTATTTGAAATTTACCTTGACAAGATCAGGGATTTATTAGACGTTACAAAAACAAACCTAGCTGTCCATGAAGACAAAAATAGAGTTCCGTTTGTAAAGGGTGCAAGTGAACGATTTGTGTCCAGCCCTGAGGAGGTTATGGAAATTATTGATGAAGGAAAAGCCAATCGTCATGTTGCAGTCACAAACATGAATGAGCATAGTTCAAGAAGCCATAGTATTTTTCTCCTCCACATTAAACAAGAAAATGTGGAATCCAACAAGAAACTAAGCGGCAAGCTTTATTTAGTGGATTTAGCAGGATCTGAAAAGGTCAGCAAAACTGGAGCAGAGGGTGCACTCCTTGATGAAGCCAAGAACATCAACAAGTCATTGTCTGCTCTAGGAAATGTAATTTCTGCATTAGCAGAAGGAACAAAAACCCATGTTCCCTACAGAGACAGCAAAATGACGAGAATATTGCAGGAAAGTTTGGGTGGCAATGCAAGAACAACCATAATCATCTGCTGTTCTCCGTCATCATTCAATGAGCAAGAAACTCGCTCAACTCTTATGTTTGGCCAAAGAGCCAAGACCATCAAGAACGTTGTGGTAATCAACGAAGAACTCACAGCAGAAGAATGGAAAAGACGCTTTGAGAAAGAAAAGGAAAAGGTTTCCAAGCTTCGAGGAGCGTTGGGAAGATACGAACAAGAACTGCAGCGGTGGCGTGGAGGCGAGTCAGTTCCTACCAATGAACAGATGTCGAATGCCAAAGACAATCGTAATTCTCAGGTGTTTGAGAGCCTTGCACTCTTGGCTCCTTCACAACCCGCTGTCAGTGACAGGGAAAGGAAGAAATTTGAGGATGAAAAATCCAAGCTCTACACCCAGCTGGACGGGAAGGATGATGAAATTCAAAATCAGGCGCGCTTAATCAATCAACTGAGGGAGCAACTAACTGAACAAGAGGAAGCTCTGAAGACGACTCAAGTCGACAGCGAGAAGCTGCAGATGCAGATCAGTTCCATGCAGGGTGAGAGCGAGACGTCGAAAACGGAGGTCAAAGAAGTGCTCCAAGCTCTCGAAGAGCTGGCTGTCAATTATGACCAGAAGCTGCAAGAGGTTGAGACGAAAACTAAGGACAACGAGAAGCTATCTGATGAATTATCACTCAAACAGACGCAGCTCCACAAAGTTTCTAAAGAACTAGTGGAGATCAAAGACAGTACATCAGTGTTAAGAAAACGACTGGCTGAAATGATGAACAGTTTACTGTCTGATCTGGGTGAAATTGGTAATGTCATTGGAGGAAATGCTGCCGAGATTAAGAAACCCAACATTGACTGTAGTGGCAAATTAGACGAAGATTTCACGGTGGCCCGACTTTACGTGAATAAAATCAAGTCAGAAGTCAAAACTCTATCTGTGCGTTCCAGTAGCCTGGAATTAACGGAAAGCGATTTGAAGTCATCCCTGGATGGAAAGAACAAAGAGTTGAACCAATCAATGCTTCTTATATCACAGTATGAAGCTAAAACGAAGACCCTCGAGGGAAACATGAAGGAGATGGAGTCGAAGAAGAGGATTTTAGAAGAAGCTGTTGACTCACTGAATGAAGAGATAGCCAAGCTCAAGGCGAAAGCTCAGATGCATGCTCTGGCTCTGAAAGACAAGGAAGAAGAACATGCTGGTATGCTTCTCACGGCAGGAGAAATTCAGTCTGCACTGGAGAAGCAAATGATCAGTCATCGTGATGCGCATCAGAAACAACTGTCCTCTCTTAGAGACGAGATTGAATCACAGCAAGGAACTATTGCAGCAATCAAGGAAACCAATCAGAAGCAATCTTTAGAAAGGGATCACCTTATGCTCGAAAATGACTCTATGAAGAGGGAACTTGACGAGAAATCAGTTCGATTGAGCGACTTGAATGTTCAAGCGGAGAAGAGAGAACAAGCTAAGAATGATCTGAAAGGACTCGAAGAGACTGTGCATAAAGAGTTGGCGACGCTGTACCGACTTCGGCAGTTGTTCGTCAAAGACTTACAGGCTCGGTTAAAAGTGACCAACGCGGACACAGACACAGAGGAGGATGGGGGAAGCCAAGCACAAAAACAGAAGATTGCTTTTTTAGAGAATAATTTGGACCAGCTAACGAAGGTCCATAAACAACTCGTTAGAGATAATGCCGACCTGAGGTGTGAACTGCCAAAGCTAGAGAAGCGCCTGCGAGCAACGCAAGAGCGGGTGAAGTCTTTAGAGCAGGCTCTAAAAGAGGCTAAGGAAGGCGCGCAAAGGGACCGGGCACGATACCAGAAGGAGGTGGAGAGAATCCGGGAATCCATGAGACAGAAACAGGCCGCTGCTAGAAAGGGAGCCCAGGGGCATATAGCTAAACCCATTCGCCCGGGCCAGCAACCCACTTCACCTAGCGTCCGTCCCGGCAGCACCCCGGGCATCGGCAGCGCCTTATTAGGAATGACTCGTCTGGCTGGCGGAGCAGTCATGGGTTCCAACGTTCCCAACAGCCCAAGCACGCCTAGTTTACCCAGCTCGCCCAACGGCGCCACCATTGTGACGCCGGTGATTCGTGGCGGGAAAGGCTCGGAACCTGTGGTGACGTACAGCAAGAGGATACGAAATGCCGTCAGTACGGAATCGCTTAATCGCCCCCTCCCCCAGGGGAGCCCAAGTGCCTCACTACCTGGTGGCGTGACAAAGATTGAGCAGAATAAGTTGTCTTGCTACACGGACCTTTTAGAGGGACTCAAACAAGCTGTGCGACTGGAAAACACGCGGCAACCCAAACCACCGTTCAAGTTCGTGTATCTGCCGTACACGCTCGACGCATCTAGCCAAGTTGTTCAAGGGACAATGTACCGCGCGAACGTTAAACTAGCACCGTCAAAATGTCCAAACGCTTTAAACGAAACAAGGGAAGGTATCGAGGCTTGCGGAGTGGATTTTCTAAAGCCCGACGTTTTACAGCAAGAAAAATGTTGCTTGTTCGAGATCTGGTCGCGACCTTGGTTGCCGGGAAAGGAACGTTTACTGGTTCAGAAAGCGGAATGTAAACCACCGTTTGTGACAGGACAAGCGCAGCCGGGCCGCATTCGTGTCACAACGAAGATTACTGTCTATCCCTTTGAATGGCGCCATTCCTCGCCAGATTACGAAAGAAGGCGCAGTTCAGCAGCATCAGCAGGTGCGGTTACTCACTCATCCAATGCGCACATGCGCGCTGCAGCCAGCGTGGACCGGCTCAACATTATGGGCGAAGGGAATTCTGGGAGAAAATTGCCGTCGATGCCGGATTCAATGCAGCGATCACCGATGAAGATTTCAGGTCGTGAAGGAGAAATAGCAGCTCTGAAGAGAAGCAGCCGGCGGTCAGCCTCCTCGCACAACTTAGTAAATAATCCGGATGGTGGACCATGGGAGATGAGAAAACAATCGGCCTCATAA

Transcript

OS493_010807-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000010	Domain	Cystatin domain	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR046350	Homologous_superfamily	Cystatin superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0004869	Molecular Function	cysteine-type endopeptidase inhibitor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_010807-T1 global RNA-seq network