Detailed information of OS493_010470-T1 in Lophelia pertusa

Genomic Location: scaffold_25:2290127...2302660
NR annotation: KAJ7392810.1, hypothetical protein OS493_010470 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A1L8GWK2Regulatory factor X 4 OS=Xenopus laevis OX=8355 GN=rfx4.L PE=2 SV=1
Q33E94Transcription factor RFX4 OS=Homo sapiens OX=9606 GN=RFX4 PE=1 SV=2
Q7TNK1Transcription factor RFX4 OS=Mus musculus OX=10090 GN=Rfx4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02257RFX_DNA_bindingRFX DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003150DomainDNA-binding RFX-type winged-helix domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR039779FamilyRFX-like DNA-binding proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12619RFX TRANSCRIPTION FACTOR FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_010470-T1 global co-expression network
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