Gene detail

Detailed information of OS493_010406-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_010406-T1	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED	scaffold_25	1707838	1717779	+

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_010406-T1

ATGGCGCATAACAAACCAAGACGTGGGGAAAATTTGGTGGATGTCTTGTACGATTTAAAGTTACTTTCCGTACACGGATATGAGGAGGAGGCTTCCACTATAGCAACTGGGAGAGAACTGAGAGAACAAAGGCTGGAAGAGCTGAAGAGAAAACACGGAACTCTACCAGGGGGATATTTGCGGATCTTAAAAGATGTAGAACAAACTCGCGATCGCCAACATATTTTGGAAGAGTACTACCTGAAAGTAAAGGATATTCTTCAGGAAACCCGAGCGATCAGTCGGCAAGAAAAAGACGACTTCCTAACTGGAGCTGTGGAATGCATTGAAGATCTCAAAAACCAGAGATACACTGTTCTCATTGCTGGAGAGACTAGTGCTGGAAAGAGCAGTCTAATAAATCTCTTATTGAATGACCACGTTCTTCCGACCAGCATCAAGCAAAACACACTGACCATCTGTGAAATATCGTATGGAGTAGAGAAAGAAGCTGTGGTACACTTCTCTAAACAAAGTAAACCTTCCAAAATCCTAAAGGAGAGCGAGTTTGACAAGATTAAAGAGTACATTGAAAAGCCTAAAGAGGATGAACACTGGTGCGAGAGAATAGAGATCAAGATACCCAGCCCATTCTTGAAGGGTGGTGTAGTGATTGTCGACAGCCCAGGAATCGGGGATTCAGAACATGTCAGCGAGATAGCCTTAAAATATTTGCCGCAAGCCTACGCCTTCATCTACGTAATAAACAGTGCAAATGCCGGAGGGTTGCAGGAGGACAGGCTTTTGCGTATCGTGGGGGAATGGAGAAAACTCTACAAAGGAGAAAAACGGTGTGGCATCACTGCCGAGTCTGCTCTGTTTGTCTGCAATAAGTGGGACGAAGTGGAAAGACAAAGCAACCAAGCCGAAAGAGACGATCTCGAAAAGCACATCATCGACAAACTCAGAGAGAAGATCCCCGAACTTGATGAAAAATCCCAAGTGATTAAAATGTCGGTGTTCACAGCAGCCCAAGTGCAAAAGAAGTTTAACATGATGAGTGATGACCTAAACAATCTGATTAACGGACTACAACGTCTTCTACCCATTTGTATTGAAAAGAAAACAGAATACTTCTACTACTGGATTAGTGGTCAGCTGTGCAACTTGTCGGATCAGGTAAAAGGTGAAATGCGAAATGCCAAACGAAACGGGGAGGAACGACGCAAGGCTGGTGAAGAACTTGAAGTGAAACTGGACAAGCTAAAACAAGGCATTCCCATCCGAGAGATTGAAGACGCAATTTCCAATCACGAGAAAAACCTTTGTCGAAAGATGACATCTTACTTGCAATCTGAAGACGTGAGAGGTCGGTTTTGTACATGGTCAGCCAAAGACCTGCCTCAAGTTGACGACTGTCATAAAACAAATGTCACAAAGATCAAGCAGACGTATAGCAGATGCATTGAAGAACGATTCCAAACTTTTCTTCAGAACTGGGAAAACAGAGAAAAGCATTTTACAAAAGCCTATGACGACCTTGAGAAACGTTTTCATCAAGGTTTCTTCGAATTTGAGAAAGACTTCCGTGCAATTGATCGTGTACTCGTCGGTGACTCGGGAGATGAGTTTATGTCTTTTGAGATCAGTCGTCCTGCTGGCAGGCTGTTCTCGCCCTTAGATACAAGAATGAAAAAATTCCTAGTGGTGACAGGTGCAATTTTCATGCCAGTTTTGTTTTCCGTTGGCCTGGCTGCAGGATTTCTTTCCGCGCCCGTGTTTGGCTACATGGTCATCGAAAAGCATCTTAAAGAGCGGAAACTGATTAACGATTCTTGCCAAGCCCTAACAGAACTGTCGAAAGAGTTCCTCGAGGATTTCATCAACAACGAAGTTCTCGACCACGTCCGGGACAAATTCTCCGAGGAGACGAATCGTATTGCCAGCATAAAGAGATGCCACCAACAGCTGATTACCAAATATGAGCAGAGATGCAAGGATCTCACAAGAAGCAAAGACGAATCAAGAAATAAAGAGATCGTGGAAAAGAACGGTCCGTTACACGCGAAGCTGCAGGAGATGAATGAAACGTTGATGTTTGATGCCATCCAGAATGGAATACAGGTGATGTACCCGTGTTGTCAAATCGATCCAAGAAGACTTCGTTACAAAGAGAGAGAATTATTGGGGGAAGGAAGCTATGGTCAAGTCTTCAAAGGAAGATTCACTCTTCCCGGACATGCAAGAAGGGACGTTGCGGTAAAGAAGCTTCGAGAAGTTCCGTATCCATCAAACGTAGCTGCCTTCCTCCAAGAAGCAGCCATGTTGAAGTAA

Transcript

OS493_010406-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00350	Dynamin_N	Dynamin family	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR045063	Domain	Dynamin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR26392	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_010406-T1 global RNA-seq network