Detailed information of OS493_010327-T1 in Lophelia pertusa

Genomic Location: scaffold_25:1073514...1082536
NR annotation: KAJ7392676.1, hypothetical protein OS493_010327 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3B752Thymidylate kinase OS=Danio rerio OX=7955 GN=dtymk PE=2 SV=1
Q0WW55Thymidylate kinase OS=Arabidopsis thaliana OX=3702 GN=ZEU1 PE=2 SV=1
Q54GN2Thymidylate kinase OS=Dictyostelium discoideum OX=44689 GN=dtymk PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02223Thymidylate_kinThymidylate kinaseDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF18366zf_ZICZic proteins zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR039430DomainThymidylate kinase-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR018094FamilyThymidylate kinaseInterproscan
IPR041643DomainZIC protein, zinc finger domainInterproscan
IPR050329FamilyGLI C2H2-type zinc-fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19818ZINC FINGER PROTEIN ZIC AND GLIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004798Molecular Functionthymidylate kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006233Biological ProcessdTDP biosynthetic processInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_010327-T1 global co-expression network
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