Detailed information of OS493_010231-T1 in Lophelia pertusa

Genomic Location: scaffold_25:206504...232222
NR annotation: KAJ7392582.1, hypothetical protein OS493_010231 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ERU9E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2
H2QII6E3 SUMO-protein ligase RanBP2 OS=Pan troglodytes OX=9598 GN=RANBP2 PE=1 SV=1
P49792E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF00638Ran_BP1RanBP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR000156DomainRan binding domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23138RAN BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12172RANBP2, NUP358; E3 SUMO-protein ligase RanBP2EC:2.3.2.-
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_010231-T1 global co-expression network
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