Detailed information of OS493_010179-T1 in Lophelia pertusa

Genomic Location: scaffold_24:3588519...3594099
NR annotation: KAJ7337318.1, hypothetical protein OS493_010179 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99816Tumor susceptibility gene 101 protein OS=Homo sapiens OX=9606 GN=TSG101 PE=1 SV=2
Q61187Tumor susceptibility gene 101 protein OS=Mus musculus OX=10090 GN=Tsg101 PE=1 SV=2
Q6IRE4Tumor susceptibility gene 101 protein OS=Rattus norvegicus OX=10116 GN=Tsg101 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|UBC-like|UEV
Ubiquitin FamilyE2|UEV|UEV

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02825WWEWWE domainFamilyInterproscan
PF05743UEVUEV domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004170DomainWWE domainInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR008883DomainUbiquitin E2 variant, N-terminalInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR052070FamilyESCRT-I complex UEV domain-containing proteinInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23306TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015031Biological Processprotein transportInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000813Cellular ComponentESCRT I complexInterproscan
GO:0008333Biological Processendosome to lysosome transportInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

Expression pattern
 Expression trend for OS493_010179-T1 global co-expression network
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