Detailed information of OS493_010163-T1 in Lophelia pertusa

Genomic Location: scaffold_24:3456937...3457890
NR annotation: KAJ7337304.1, Guanine nucleotide-binding protein subunit beta-2-like 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4R7Y4Small ribosomal subunit protein RACK1 OS=Macaca fascicularis OX=9541 GN=GNB2L1 PE=2 SV=3
P63243Small ribosomal subunit protein RACK1 OS=Bos taurus OX=9913 GN=RACK1 PE=2 SV=3
P63247Small ribosomal subunit protein RACK1 OS=Gallus gallus OX=9031 GN=RACK1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045223FamilySmall ribosomal subunit protein RACK1-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19868RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001934Biological Processpositive regulation of protein phosphorylationInterproscan
GO:0005080Molecular Functionprotein kinase C bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14753RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein-Exosomeko04147deepkoala

Expression pattern
 Expression trend for OS493_010163-T1 global co-expression network
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