Detailed information of OS493_010119-T1 in Lophelia pertusa

Genomic Location: scaffold_24:3057452...3071691
NR annotation: KAJ7337262.1, Cyclic AMP-dependent transcription factor ATF-6 beta [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F6VAN0Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Mus musculus OX=10090 GN=Atf6 PE=1 SV=2
G3V909Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Rattus norvegicus OX=10116 GN=Atf6 PE=2 SV=1
P18850Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Homo sapiens OX=9606 GN=ATF6 PE=1 SV=3
 Gene family
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR051882FamilyATF bZIP Transcription FactorsInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46164ATF6, ISOFORM CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan

Expression pattern
 Expression trend for OS493_010119-T1 global co-expression network
TOP