Detailed information of OS493_010082-T1 in Lophelia pertusa

Genomic Location: scaffold_24:2552934...2553902
NR annotation: KAJ7337225.1, E3 ubiquitin-protein ligase NRDP1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H4P4E3 ubiquitin-protein ligase NRDP1 OS=Homo sapiens OX=9606 GN=RNF41 PE=1 SV=2
Q8BH75E3 ubiquitin-protein ligase NRDP1 OS=Mus musculus OX=10090 GN=Rnf41 PE=1 SV=1
Q5R7T5E3 ubiquitin-protein ligase NRDP1 OS=Pongo abelii OX=9601 GN=RNF41 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF08941USP8_interactUSP8 interactingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037255Homologous_superfamilyNRDP1, C-terminalInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR003613DomainU-box domainInterproscan
IPR015036DomainE3 ubiquitin-protein ligase NRDP1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11981RNF41, NRDP1; E3 ubiquitin-protein ligase NRDP1EC:2.3.2.27
Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_010082-T1 global co-expression network
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