Detailed information of OS493_009910-T1 in Lophelia pertusa

Genomic Location: scaffold_24:649343...651647
NR annotation: KAJ7337060.1, Hepatocyte nuclear factor 4-alpha [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91766Hepatocyte nuclear factor 4-alpha OS=Xenopus laevis OX=8355 GN=hnf4a PE=2 SV=2
Q9WUU6Hepatocyte nuclear factor 4-gamma OS=Mus musculus OX=10090 GN=Hnf4g PE=2 SV=2
Q14541Hepatocyte nuclear factor 4-gamma OS=Homo sapiens OX=9606 GN=HNF4G PE=1 SV=3
 Gene family
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001723FamilyNuclear hormone receptorInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR050274FamilyNuclear hormone receptor family NR2 subfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24083NUCLEAR HORMONE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

Expression pattern
 Expression trend for OS493_009910-T1 global co-expression network
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