Detailed information of OS493_009630-T1 in Lophelia pertusa

Genomic Location: scaffold_23:913443...942178
NR annotation: KAJ7363475.1, Bromodomain and WD repeat-containing protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q921C3Bromodomain and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Brwd1 PE=1 SV=2
Q8WWQ0PH-interacting protein OS=Homo sapiens OX=9606 GN=PHIP PE=1 SV=2
Q9NSI6Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=BRWD1 PE=1 SV=4
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487DomainBromodomainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR052060FamilyBromodomain and WD repeat-containingInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16266WD REPEAT DOMAIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11798BRWD1_3; bromodomain and WD repeat domain containing protein 1/3-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_009630-T1 global co-expression network
TOP