Detailed information of OS493_009565-T1 in Lophelia pertusa

Genomic Location: scaffold_23:261484...269914
NR annotation: KAJ7363413.1, Dip2/Utp12 protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UNX4WD repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=WDR3 PE=1 SV=1
Q8BHB4WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Wdr3 PE=1 SV=1
Q54S79WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr3 PE=3 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04003Utp12Dip2/Utp12 FamilyFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051570FamilyTBC1 domain family involved in cilium biogenesisInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR007148DomainSmall-subunit processome, Utp12Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14556DIP2, UTP12, WDR3; U3 small nucleolar RNA-associated protein 12-Ribosome biogenesisko03009deepkoala

Expression pattern
 Expression trend for OS493_009565-T1 global co-expression network
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