Detailed information of OS493_009542-T1 in Lophelia pertusa

Genomic Location: scaffold_23:48688...66015
NR annotation: KAJ7363390.1, hypothetical protein OS493_009542 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15288zf-CCHC_6Zinc knuckleDomainInterproscan
PF02732ERCC4ERCC4 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041670DomainZinc knuckleInterproscan
IPR047416DomainMUS81, XPF-like nuclease domainInterproscan
IPR006166DomainERCC4 domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR033309FamilyCrossover junction endonuclease Mus81Interproscan
IPR047417DomainMUS81, winged helix domainInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000727Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006308Biological ProcessDNA catabolic processInterproscan
GO:0008821Molecular Functioncrossover junction DNA endonuclease activityInterproscan
GO:0031573Biological Processmitotic intra-S DNA damage checkpoint signalingInterproscan
GO:0048257Molecular Function3'-flap endonuclease activityInterproscan
GO:0048476Cellular ComponentHolliday junction resolvase complexInterproscan

Expression pattern
 Expression trend for OS493_009542-T1 global co-expression network
TOP