Detailed information of OS493_009457-T1 in Lophelia pertusa

Genomic Location: scaffold_22:3055026...3067481
NR annotation: KAJ7374120.1, hypothetical protein OS493_009457 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7T0Q5Nucleolar protein 10 OS=Xenopus laevis OX=8355 GN=nol10 PE=2 SV=1
Q6NVM6Nucleolar protein 10 OS=Xenopus tropicalis OX=8364 GN=nol10 PE=2 SV=1
Q66H99Nucleolar protein 10 OS=Rattus norvegicus OX=10116 GN=Nol10 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08159NUC153NUC153 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR040382FamilyNucleolar protein 10/Enp2Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR012580DomainNUC153Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14927UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14788NOL10, ENP2; ribosome biogenesis protein ENP2-Ribosome biogenesisko03009deepkoala

Expression pattern
 Expression trend for OS493_009457-T1 global co-expression network
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