Detailed information of OS493_009405-T1 in Lophelia pertusa

Genomic Location: scaffold_22:2580860...2600557
NR annotation: KAJ7374074.1, hypothetical protein OS493_009405 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9Q236ATP-binding cassette sub-family C member 4 OS=Mus musculus OX=10090 GN=Abcc4 PE=1 SV=1
F1M3J4ATP-binding cassette subfamily C member 4 OS=Rattus norvegicus OX=10116 GN=Abcc4 PE=1 SV=3
O15439ATP-binding cassette sub-family C member 4 OS=Homo sapiens OX=9606 GN=ABCC4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR044726DomainABC transporter C family, six-transmembrane helical domain 2Interproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR050173FamilyATP-binding cassette transporter CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24223ATP-BINDING CASSETTE SUB-FAMILY CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan

Expression pattern
 Expression trend for OS493_009405-T1 global co-expression network
TOP