Detailed information of OS493_009246-T1 in Lophelia pertusa

Genomic Location: scaffold_22:1223480...1231165
NR annotation: KAJ7373921.1, hypothetical protein OS493_009246 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17103Myc protein (Fragment) OS=Asterias rubens OX=7604 GN=MYC PE=2 SV=1
Q90341Transcriptional regulator Myc-1 OS=Cyprinus carpio OX=7962 GN=myca PE=3 SV=1
P49709Transcriptional regulator Myc OS=Carassius auratus OX=7957 GN=myc PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01056Myc_NMyc amino-terminal regionFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR012682DomainTranscription regulator Myc, N-terminalInterproscan
IPR002418FamilyTranscription regulator MycInterproscan
IPR050433FamilyMyc family transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45851MYC PROTO-ONCOGENEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_009246-T1 global co-expression network
TOP