Detailed information of OS493_008957-T1 in Lophelia pertusa

Genomic Location: scaffold_21:2006304...2008076
NR annotation: KAJ7380495.1, hypothetical protein OS493_008957 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90259Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE=2 SV=1
Q90260Achaete-scute homolog 1b OS=Danio rerio OX=7955 GN=ascl1b PE=2 SV=1
Q06234Achaete-scute homolog 1 OS=Xenopus laevis OX=8355 GN=ascl1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

Expression pattern
 Expression trend for OS493_008957-T1 global co-expression network
TOP