Detailed information of OS493_008947-T1 in Lophelia pertusa

Genomic Location: scaffold_21:1891023...1907031
NR annotation: KAJ7380485.1, anaphase-promoting complex subunit cdc27 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2A6Q5Cell division cycle protein 27 homolog OS=Mus musculus OX=10090 GN=Cdc27 PE=1 SV=1
Q4V8A2Cell division cycle protein 27 homolog OS=Rattus norvegicus OX=10116 GN=Cdc27 PE=2 SV=1
A7Z061Cell division cycle protein 27 homolog OS=Bos taurus OX=9913 GN=CDC27 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF12895ANAPC3Anaphase-promoting complex, cyclosome, subunit 3RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12558CELL DIVISION CYCLE 16,23,27Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005680Cellular Componentanaphase-promoting complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007091Biological Processmetaphase/anaphase transition of mitotic cell cycleInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031145Biological Processanaphase-promoting complex-dependent catabolic processInterproscan
GO:0051301Biological Processcell divisionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03350APC3, CDC27; anaphase-promoting complex subunit 3-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_008947-T1 global co-expression network
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