Detailed information of OS493_008847-T1 in Lophelia pertusa

Genomic Location: scaffold_21:589786...613060
NR annotation: KAJ7380391.1, hypothetical protein OS493_008847 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2ARV4Low-density lipoprotein receptor-related protein 2 OS=Mus musculus OX=10090 GN=Lrp2 PE=1 SV=1
C0HL13Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1
P98158Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR033116Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR050778FamilyCueball/EGF/LRP/NidogenInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46513VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0017147Molecular FunctionWnt-protein bindingInterproscan
GO:0042813Molecular FunctionWnt receptor activityInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan

Expression pattern
 Expression trend for OS493_008847-T1 global co-expression network
TOP