Detailed information of OS493_008557-T1 in Lophelia pertusa

Genomic Location: scaffold_20:1241669...1252524
NR annotation: KAJ7386429.1, hypothetical protein OS493_008557 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O77264RNA 3'-terminal phosphate cyclase OS=Drosophila melanogaster OX=7227 GN=Rtca PE=1 SV=1
Q8U0N7RNA 3'-terminal phosphate cyclase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=rtc PE=1 SV=1
O15746Probable RNA 3'-terminal phosphate cyclase OS=Dictyostelium discoideum OX=44689 GN=rtca PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00226DnaJDnaJ domainDomainInterproscan
PF05189RTC_insertRNA 3'-terminal phosphate cyclase (RTC), insert domainDomainInterproscan
PF01137RTCRNA 3'-terminal phosphate cyclaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001623DomainDnaJ domainInterproscan
IPR036553Homologous_superfamilyRNA 3'-terminal phosphate cyclase, insert domain superfamilyInterproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR000228FamilyRNA 3'-terminal phosphate cyclaseInterproscan
IPR037136Homologous_superfamilyRNA 3'-terminal phosphate cyclase domain superfamilyInterproscan
IPR013791DomainRNA 3'-terminal phosphate cyclase, insert domainInterproscan
IPR023797DomainRNA 3'-terminal phosphate cyclase domainInterproscan
IPR018253Conserved_siteDnaJ domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11096RNA 3' TERMINAL PHOSPHATE CYCLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003963Molecular FunctionRNA-3'-phosphate cyclase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

Expression pattern
 Expression trend for OS493_008557-T1 global co-expression network
TOP