Detailed information of OS493_008470-T1 in Lophelia pertusa

Genomic Location: scaffold_20:249372...257354
NR annotation: KAJ7386349.1, hypothetical protein OS493_008470 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4R3J0RNA 3'-terminal phosphate cyclase OS=Macaca fascicularis OX=9541 GN=RTCA PE=2 SV=1
O00442RNA 3'-terminal phosphate cyclase OS=Homo sapiens OX=9606 GN=RTCA PE=1 SV=1
Q2HJ88RNA 3'-terminal phosphate cyclase OS=Bos taurus OX=9913 GN=RTCA PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05189RTC_insertRNA 3'-terminal phosphate cyclase (RTC), insert domainDomainInterproscan
PF01137RTCRNA 3'-terminal phosphate cyclaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036553Homologous_superfamilyRNA 3'-terminal phosphate cyclase, insert domain superfamilyInterproscan
IPR013791DomainRNA 3'-terminal phosphate cyclase, insert domainInterproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR037136Homologous_superfamilyRNA 3'-terminal phosphate cyclase domain superfamilyInterproscan
IPR023797DomainRNA 3'-terminal phosphate cyclase domainInterproscan
IPR017770FamilyRNA 3'-terminal phosphate cyclase type 1Interproscan
IPR000228FamilyRNA 3'-terminal phosphate cyclaseInterproscan
IPR020719Conserved_siteRNA 3'-terminal phosphate cyclase-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11096RNA 3' TERMINAL PHOSPHATE CYCLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003963Molecular FunctionRNA-3'-phosphate cyclase activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01974RTCA, rtcA; RNA 3'-terminal phosphate cyclase (ATP)EC:6.5.1.4
Enzymes with EC numbers-deepkoala

Expression pattern
 Expression trend for OS493_008470-T1 global co-expression network
TOP