Detailed information of OS493_008389-T1 in Lophelia pertusa

Genomic Location: scaffold_19:3205082...3206363
NR annotation: KAJ7393091.1, POU domain, class 4, transcription factor 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90435POU domain, class 4, transcription factor 3 OS=Danio rerio OX=7955 GN=pou4f3 PE=2 SV=2
Q15319POU domain, class 4, transcription factor 3 OS=Homo sapiens OX=9606 GN=POU4F3 PE=1 SV=1
Q63955POU domain, class 4, transcription factor 3 OS=Mus musculus OX=10090 GN=Pou4f3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF00157PouPou domain - N-terminal to homeobox domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000327DomainPOU-specific domainInterproscan
IPR050255FamilyPOU domain transcription factorInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR013847DomainPOU domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11636POU DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09366POU4F, BRN3; POU domain transcription factor, class 4-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_008389-T1 global co-expression network
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