Detailed information of OS493_008349-T1 in Lophelia pertusa

Genomic Location: scaffold_19:2557478...2566193
NR annotation: KAJ7393053.1, WD domain repeat-containing protein 55 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1L112WD repeat-containing protein 55 OS=Rattus norvegicus OX=10116 GN=Wdr55 PE=2 SV=1
Q9CX97WD repeat-containing protein 55 OS=Mus musculus OX=10090 GN=Wdr55 PE=1 SV=2
Q58DT8WD repeat-containing protein 55 OS=Bos taurus OX=9913 GN=WDR55 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050505FamilyWD repeat-containing protein WDR55/POC1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44019WD REPEAT-CONTAINING PROTEIN 55Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24750WDR55, JIP5; WD repeat-containing protein 55-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Expression pattern
 Expression trend for OS493_008349-T1 global co-expression network
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