Detailed information of OS493_008246-T1 in Lophelia pertusa

Genomic Location: scaffold_19:1781599...1797747
NR annotation: KAJ7392999.1, Protein SDA1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7S6A5Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1
A5D7C2Protein SDA1 homolog OS=Bos taurus OX=9913 GN=SDAD1 PE=2 SV=1
Q5XIQ5Protein SDA1 homolog OS=Rattus norvegicus OX=10116 GN=Sdad1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05285SDA1_domSDA1, conserved domainDomainInterproscan
PF08158SDA1_HEATSDA1, HEAT repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007949DomainSDA1, middle domainInterproscan
IPR012977DomainSDA1, N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR027312FamilySda1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12730HSDA/SDA1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000055Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14856SDA1, SDAD1; protein SDA1-Ribosome biogenesisko03009deepkoala

Expression pattern
 Expression trend for OS493_008246-T1 global co-expression network
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