Detailed information of OS493_007961-T1 in Lophelia pertusa

Genomic Location: scaffold_18:1969758...1982825
NR annotation: KAJ7337804.1, Chromatin accessibility complex protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9LN09DNA polymerase II subunit B3-1 OS=Arabidopsis thaliana OX=3702 GN=DPB3-1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00808CBFD_NFYB_HMFHistone-like transcription factor (CBF/NF-Y) and archaeal histoneDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003958DomainTranscription factor CBF/NF-Y/archaeal histone domainInterproscan
IPR050568FamilyTranscription and DNA Replication RegulatorsInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0008623Cellular ComponentCHRACInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11656CHRAC1, CHRAC15; chromatin accessibility complex protein 1-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_007961-T1 global co-expression network
TOP