Detailed information of OS493_007929-T1 in Lophelia pertusa

Genomic Location: scaffold_18:1057026...1061849
NR annotation: KAJ7337774.1, hypothetical protein OS493_007929 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JPN4Endoribonuclease ZC3H12A OS=Rattus norvegicus OX=10116 GN=Zc3h12a PE=2 SV=1
Q5D1E7Endoribonuclease ZC3H12A OS=Mus musculus OX=10090 GN=Zc3h12a PE=1 SV=2
Q5D1E8Endoribonuclease ZC3H12A OS=Homo sapiens OX=9606 GN=ZC3H12A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18039UBA_6UBA-like domainDomainInterproscan
PF11977RNase_Zc3h12aZc3h12a-like Ribonuclease NYN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040546DomainRege-1, UBA-like domainInterproscan
IPR021869DomainRibonuclease Zc3h12a-like, NYN domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR051101FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12876N4BP1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0036464Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan

Expression pattern
 Expression trend for OS493_007929-T1 global co-expression network
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