Detailed information of OS493_007828-T1 in Lophelia pertusa

Genomic Location: scaffold_17:3412332...3418240
NR annotation: KAJ7365177.1, Protein AF-17 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55197Protein AF-10 OS=Homo sapiens OX=9606 GN=MLLT10 PE=1 SV=2
O54826Protein AF-10 OS=Mus musculus OX=10090 GN=Mllt10 PE=1 SV=2
P55198Protein AF-17 OS=Homo sapiens OX=9606 GN=MLLT6 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13831PHD_2PHD-fingerFamilyInterproscan
PF13832zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049781DomainAF-10/AF-17, PHD fingerInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR050701FamilyHistone Modification RegulatorInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13793PHD FINGER PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

Expression pattern
 Expression trend for OS493_007828-T1 global co-expression network
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