Detailed information of OS493_007824-T1 in Lophelia pertusa

Genomic Location: scaffold_17:3350400...3351254
NR annotation: KAJ7365173.1, Pancreas transcription factor 1 subunit alpha [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZSX3Pancreas transcription factor 1 subunit alpha OS=Danio rerio OX=7955 GN=ptf1a PE=2 SV=1
Q4ZHW1Pancreas transcription factor 1 subunit alpha OS=Xenopus laevis OX=8355 GN=ptf1a PE=2 SV=1
Q9QX98Pancreas transcription factor 1 subunit alpha OS=Mus musculus OX=10090 GN=Ptf1a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09073PTF1A; pancreas-specific transcription factor 1a-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_007824-T1 global co-expression network
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